(1) Big data research on the origin and evolution of gene trans-splicing and its function in gene evolution, person in charge, national mission, 2016-01--2019-12
(2) Molecular module system analysis and coupling assembly, participation, Chinese Academy of Sciences project, 2013-08--2018-08
(3) Evaluation, formation mechanism and molecular improvement of special nutritional quality of crops, participation, national task, 2013-01--2017-12
(4) Natural product small molecule cell expression map information database and molecular function algorithm research, person in charge, national task, 2013-01--2016-12
(5) Data generation models and optimized processing methods of various next-generation sequencing technologies, person in charge, national task, 2012-01--2016-12
(6) Research on gene expression regulation technology, participation, national tasks, 2016-07--2020-12
(7) Analysis of gene evolution dynamics and functional adaptation brought about by RNA editing based on omics big data, person in charge, national mission, 2018-01--2021-12
(8) Enzyme library construction, person in charge, Chinese Academy of Sciences project, 2016-11--2020-12
(9) Construction of emergency drug molecular target screening system based on chemical biology and mass spectrometry cutting-edge technology and related technical services, participation, national task, 2018-01--2022-12
(10) Systematic discovery and application potential evaluation of abyssal biological natural products, person in charge, national task, 2018-08--2021-12
(11) Molecular Network of Rice Functional Secondary Metabolism, Principal Investigator, Project of Chinese Academy of Sciences, 2019-11--2024-10
(12) Physical library and digital construction of industrial reaction enzyme library, person in charge, project of Chinese Academy of Sciences, 2021-11--2024-10
(13) Phylogenetic evolution and population-specific functions of plant long non-coding RNAs analyzed by omics big data, person in charge, national mission, 2020-01--2023-12
